seqcombo
package. (2021-07-20, Tue)gghelix()
and geom_helix()
.(2021-04-1, Thu)ggSeqBundle()
to plot Sequence Bundles for MSAs based ggolot2
(2021-03-18, Thu)ggtreeExtra
. (2021-01-21, Thu)custom_color
. (2020-12-28, Mon)by_conservation
.(2020-12-22, Tue)Hydrophobicity
and a new paramter border
.(2020-12-21, Mon)facet_msa()
.(2020-12-03, Thu)geom_msaBar()
.(2020-12-03, Thu)ignore_gaps
used in consensus views.(2020-10-09, Fri)LETTER
and CN6
provided by ShixiangWang.issues#8
geom_*()
(2020-4-24, Fri)seq_name
in ggmsa()
(2020-4-23, Thu)facet_msa()
–> break down the MSA (2020-4-17, Fri)posHighlighted
in ggmsa()
(2020-4-17, Fri)geom_asterisk()
to optimized geom_seed()
(2020-4-11, Sta)available_colors()
, available_fonts()
and available_msa()
(2020-3-30, Thu)geom_seed()
–> highlight the seed region in miRNA sequences (2020-3-27, Fri)ggmotif()
–> plot sequence motifs independently (2020-3-23, Tue)DroidSansMono
(2020-3-23, Mon)geom_GC()
–> plot GC content in MSA (2020-02-28, Fri)geom_seqlogo()
–> plot plot sequence motifs in MSA (2020-02-14, Fri)helvetical
, times_new_roman
, mono
(2019-12-21, Sta)serif_font
, Montserrat_font
, roboto_font
(2019-12-17, Tue)tidy_msa
seqmagick
for parsing fastatidy_msa
for converting msa file/object to tidy data frame (2019-12-09, Mon)