References
Data Integration, Manipulation and Visualization of Phylogenetic Trees
1
manual setting. the ropenscilabs/icons package will set up everything for you.
About the Author
Part I: Tree data input, output, and manipulation
2
Importing Tree with Data
3
Manipulating Tree with Data
4
Exporting tree with data
Part II: Tree data visualization and annotation
5
Phylogenetic Tree Visualization
6
Interactive
ggtree
7
Phylogenetic Tree Annotation
8
Visual Exploration of Phylogenetic Trees
9
Plotting tree with data
10
Annotating Tree with Silhouette Images and Sub-plots
11
ggtree for Other Tree-like Objects
Part III: ggtree extensions
12
ggtreeExtra for Presenting Data on a Circular Layout
13
Other ggtree Extensions
Part IV: Miscellaneous topics
14
ggtree Utilities
15
Gallery of Reproducible Examples
Appendix
(APPENDIX) Appendix
16
Related Tools
17
Figures and Tables
References
References
17
Figures and Tables